Source code for spyrit.misc.load_data

# -----------------------------------------------------------------------------
#   This software is distributed under the terms
#   of the GNU Lesser General  Public Licence (LGPL)
#   See LICENSE.md for further details
# -----------------------------------------------------------------------------

#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Wed Jan 15 17:06:19 2020

@author: crombez
"""

import os
import sys
import glob
import numpy as np
from PIL import Image




def Files_names(Path, name_type):
    files = glob.glob(Path + name_type)
    print
    files.sort(key=os.path.getmtime)
    return [os.path.basename(x) for x in files]





def load_data_recon_3D(Path_files, list_files, Nl, Nc, Nh):
    Data = np.zeros((Nl, Nc, Nh))

    for i in range(0, 2 * Nh, 2):
        Data[:, :, i // 2] = np.rot90(
            np.array(Image.open(Path_files + list_files[i]))
        ) - np.rot90(np.array(Image.open(Path_files + list_files[i + 1])))

    return Data



# Load the data of the hSPIM and compresse the spectrale dimensions to do the reconstruction for every lambda
# odl convention the set of data has to be arranged in such way that the positive part of the hadamard motifs comes first


def load_data_Comp_1D_old(Path_files, list_files, Nh, Nl, Nc):
    Data = np.zeros((Nl, Nh))

    for i in range(0, 2 * Nh, 2):
        Data[:, i // 2] = Sum_coll(
            np.rot90(np.array(Image.open(Path_files + list_files[i])), 3), Nl, Nc
        ) - Sum_coll(
            np.rot90(np.array(Image.open(Path_files + list_files[i + 1])), 3), Nl, Nc
        )

    return Data



# Load the data of the hSPIM and compresse the spectrale dimensions to do the reconstruction for every lambda
# new convention the set of data has to be arranged in such way that the negative part of the hadamard motifs comes first


def load_data_Comp_1D_new(Path_files, list_files, Nh, Nl, Nc):
    Data = np.zeros((Nl, Nh))

    for i in range(0, 2 * Nh, 2):
        Data[:, i // 2] = Sum_coll(
            np.rot90(np.array(Image.open(Path_files + list_files[i + 1])), 3), Nl, Nc
        ) - Sum_coll(
            np.rot90(np.array(Image.open(Path_files + list_files[i])), 3), Nl, Nc
        )

    return Data